The emergence of the SARS coronavirus as a major health threat demonstrated in very clear terms the necessity of understanding the ecological relationship between human, animal and viral populations. It is widely believed that SARS CoV is the result of a zoonotic shift of coronavirus from an animal host to human hosts; however, no conclusive data have been presented that pinpoints an animal reservoir. The available genomic data is excellent for human SARS coronaviruses but that for animal coronaviruses is limited as there has been poor sampling of non-SARS coronavirus genomes from humans and animal hosts. Many emerging viruses have made the jump from wild animal to human and the dynamics of the changes which take place when viruses shift hosts are incompletely understood. The animal coronavirus sequencing project seeks to look directly at the changes in viral nucleic acid and protein sequences which occur when coronaviruses switch animal hosts. The goal of the coronavirus project is to obtain genomic information from coronaviruses isolated in the field from diverse animal hosts before, during, and after the viruses crossed species barriers and/or changed tissue tropism.
Antelope coronavirus US/OH1/2003
Bovine coronavirus E-AH187
Bovine coronavirus E-AH65
Bovine coronavirus E-AH65-TC
Bovine coronavirus R-AH187
Bovine coronavirus R-AH65
Bovine coronavirus R-AH65-TC
Calf-giraffe coronavirus US/OH3/2006
Giraffe coronavirus US/OH3-TC/2006
Giraffe coronavirus US/OH3/2003
Bovine coronavirus E-AH187-TC
Bovine coronavirus E-DB2-TC
Bovine respiratory coronavirus AH187
Human enteric coronavirus 4408
Murine coronavirus A59/R13rwt
Murine coronavirus A59/rBS
Murine coronavirus JHM/Arwt
Murine coronavirus JHM/IA
Murine coronavirus RA59/SJHM
Murine coronavirus SA59/RJHM
Murine coronavirus repA59/RJHM
Sambar deer coronavirus US/OH-WD388-TC/1994
TC-passaged Bovine respiratory coronavirus (Bovine/US/OH-440-TC/1996)
Waterbuck coronavirus US/OH-WD358-GnC/1994
Waterbuck coronavirus US/OH-WD358-TC/1994
Waterbuck coronavirus US/OH-WD358/1994
White-tailed deer coronavirus US/OH-WD470/1994
Calf-passaged Human Enteric coronavirus, strain 4408
SARS coronavirus ExoN1-3 pp1
Calf-passaged Sambar deer coronavirus (calf-sambar deer/US/OH-WD388-GnC/1994)
Feline coronavirus strain UU3
Feline coronavirus strain UU9
Mink coronavirus strain WD1127
Mink coronavirus strain WD1133
SARS coronavirus strain P2, post-production virus
SARS coronavirus strain P2, seed virus
SARS coronavirus wtic-MB pp1
Sambar deer coronavirus US/OH-WD388/1994
Feline coronavirus strain UU7
Feline coronavirus strain UU8
Murine coronavirus strain MHV-A59 B11
Feline coronavirus strain UU10
Feline coronavirus strain UU11
Feline coronavirus strain UU12
Feline coronavirus strain UU14
Feline coronavirus strain UU15
Feline coronavirus strain UU16
Feline coronavirus strain UU17
Feline coronavirus strain UU18
Feline coronavirus strain UU19
Feline coronavirus strain UU20
Feline coronavirus strain UU4
Feline coronavirus strain UU5
Feline coronavirus strain UU6
Murine coronavirus repJHM/RA59
Murine coronavirus strain MHV-A59 B12
SARS coronavirus ExoN1-4 pp1
SARS coronavirus ExoN3a-2
SARS coronavirus ExoN3a-2 pp1
SARS coronavirus wtic-MB pp2
Racoon coronavirus 092805B
Rocky Mountain Bat Coronavirus
Denison, Mark | Vanderbilt University Medical Center |
Djikeng, Appolinaire | J. Craig Venter Institute |
Ghedin, Elodie | JCVI, University of Pittsburgh School of Medicine |
Halpin, Rebecca | J. Craig Venter Institute |
Holmes, Kathryn | University of Colorado |
Janies, Daniel A. | Ohio State University Medical Center |
Kistner, Otfried | Baxter Bioscience, Austria |
Nollens, Hendrik | University of Florida |
Rottier, Peter | Ulrecht University, the Netherlands |
Saif, Linda | Ohio State University |
Spiro, David | J. Craig Venter Institute |
Weiss, Susan | University of Pennsylvania |
Zhang, Xinsheng | Ohio State University |